Know more

About cookies

What is a "cookie"?

A "cookie" is a piece of information, usually small and identified by a name, which may be sent to your browser by a website you are visiting. Your web browser will store it for a period of time, and send it back to the web server each time you log on again.

Different types of cookies are placed on the sites:

  • Cookies strictly necessary for the proper functioning of the site
  • Cookies deposited by third party sites to improve the interactivity of the site, to collect statistics

Learn more about cookies and how they work

The different types of cookies used on this site

Cookies strictly necessary for the site to function

These cookies allow the main services of the site to function optimally. You can technically block them using your browser settings but your experience on the site may be degraded.

Furthermore, you have the possibility of opposing the use of audience measurement tracers strictly necessary for the functioning and current administration of the website in the cookie management window accessible via the link located in the footer of the site.

Technical cookies

Name of the cookie

Purpose

Shelf life

CAS and PHP session cookies

Login credentials, session security

Session

Tarteaucitron

Saving your cookie consent choices

12 months

Audience measurement cookies (AT Internet)

Name of the cookie

Purpose

Shelf life

atid

Trace the visitor's route in order to establish visit statistics.

13 months

atuserid

Store the anonymous ID of the visitor who starts the first time he visits the site

13 months

atidvisitor

Identify the numbers (unique identifiers of a site) seen by the visitor and store the visitor's identifiers.

13 months

About the AT Internet audience measurement tool :

AT Internet's audience measurement tool Analytics is deployed on this site in order to obtain information on visitors' navigation and to improve its use.

The French data protection authority (CNIL) has granted an exemption to AT Internet's Web Analytics cookie. This tool is thus exempt from the collection of the Internet user's consent with regard to the deposit of analytics cookies. However, you can refuse the deposit of these cookies via the cookie management panel.

Good to know:

  • The data collected are not cross-checked with other processing operations
  • The deposited cookie is only used to produce anonymous statistics
  • The cookie does not allow the user's navigation on other sites to be tracked.

Third party cookies to improve the interactivity of the site

This site relies on certain services provided by third parties which allow :

  • to offer interactive content;
  • improve usability and facilitate the sharing of content on social networks;
  • view videos and animated presentations directly on our website;
  • protect form entries from robots;
  • monitor the performance of the site.

These third parties will collect and use your browsing data for their own purposes.

How to accept or reject cookies

When you start browsing an eZpublish site, the appearance of the "cookies" banner allows you to accept or refuse all the cookies we use. This banner will be displayed as long as you have not made a choice, even if you are browsing on another page of the site.

You can change your choices at any time by clicking on the "Cookie Management" link.

You can manage these cookies in your browser. Here are the procedures to follow: Firefox; Chrome; Explorer; Safari; Opera

For more information about the cookies we use, you can contact INRAE's Data Protection Officer by email at cil-dpo@inrae.fr or by post at :

INRAE

24, chemin de Borde Rouge -Auzeville - CS52627 31326 Castanet Tolosan cedex - France

Last update: May 2021

Menu Logo Principal Logo Biogeco Logo Université de Bordeaux

Home page

In silico: databases and models

NOM

DESCRIPTION

URL

CONTACT

METAPOP

Simulation platform.
Metapop simulates the evolution of meta-populations of monoecious plants across heterogeneous landscapes. Based on the theory of quantitative genetics, Metapop describes individuals with an explicit representation of their genetics and spatial position. Its structure comprises several interacting modules. Metapop, developed at UMR BIOGECO, is a free software under the GNU General Public License version 3.

https://quercusportal.pierroton.inra.fr/metapop/metapop-user-documentation.pdf

Antoine Kremer

PINUS PORTAL

Web portal for access to genomic and genetic resources on Pinaceae. The portal provides access to 5 separate databases (PINUSMAP, GD², CMap, EST, TREEPOP). A static section of the portal is dedicated to general information on the genus Pinus.

https://pinusportal.pierroton.inra.fr

François Ehrenmann

QUERCUS PORTAL

Web portal for access to genomic and genetic resources on fagaceae. The portal provides access to 9 different databases (QUERCUSMAP, GD², CMap, EST, TREEPOP, OAK PROVENANCE, SSR, CANDIDATE GENES, SNP). A static section of the portal is dedicated to general information on the genus Quercus.

https://quercusportal.pierroton.inra.fr

François Ehrenmann

PINELINE

Web application / database for the storage of daily micro-variation data of maritime pine and associated environmental data (internal Biogeco access only).

http://pineline.pierroton.inra.fr/pineline/

François Ehrenmann

PGD BIOGECO

  • Web interface for entering data sets and metadata, as part of the unit's PGD (intranet access)
  • Unit DMP and data flow diagram of the UMR (intranet access)

François Ehrenmann / Philippe Chaumeil

R-SYST

Shared database between EFPA & SPE of barcoding/metabarcoding reference databases for a variety of organisms of interest to INRA.

http://www.rsyst.inra.fr

Alain Franc

OAK GENOME

Web application: website concerning the sequencing of the oak genome and identification of genes important for the adaptation of forest trees.

http://www.oakgenome.fr/

François Ehrenmann

CAVISOFT

Data acquisition, control and analysis software dedicated to cavitron instruments.

http://sylvain-delzon.com/caviplace/cavisoft/

Régis Burlett

DISSEQ, DEKAM

C programs for calculating distances between sequences using the Smith-Waterman algorithm; parallelized version in MPI

Alain Franc

METABARCODING SUITE

Set of python programs for supervised and unsupervised learning in metabarcoding (environmental samples); declic for baseline analysis (molecular/morphological dictionary); diagno-syst for supervised learning; yapotu for building OTUs (unsupervised learning)

Alain Franc

FaMoz

Software for parentage analysis based on dominant and codominant genetic markers. Published in 2003, still has a tiny life.

http://www.pierroton.inra.fr/genetics/labo/Software/Famoz/

Sophie Gerber